Jobs in squeue were skipped quickly

VFVS VFVS 1
#1

All the jobs were skipped in seconds after I submitted all the jobs. And no output…
4 jobs were finished just after the submission and no dockings were started…

         JOBID PARTITION     NAME     USER ST       TIME  NODES NODELIST(REASON)
          3981       All    t-6.1      Woo PD       0:00      2 (Resources)
          3982       All    t-7.1      Woo PD       0:00      2 (Priority)
          3983       All    t-8.1      Woo PD       0:00      2 (Priority)
          3984       All    t-9.1      Woo PD       0:00      2 (Priority)
          3985       All   t-10.1      Woo PD       0:00      2 (Priority)
          3980       All    t-5.1      Woo  R       0:09      2 virtualScreening,virtualScreening2

============================================================================

                                     Workflow Status

::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::

                                         Joblines

…

Number of jobfiles in the workflow/jobfiles/main folder: 10
Number of joblines in the batch system: 7
Number of joblines in the batch system currently running: 1

  • Number of joblines in queue “All” currently running: 1
    Number of joblines in the batch system currently not running: 6

  • Number of joblines in queue “All” currently not running: 6
    Number of cores/slots currently used by the workflow: 64

                                        Collections

…

Total number of ligand collections: 724
Number of ligand collections completed: 0
Number of ligand collections in state “processing”: 96
Number of ligand collections not yet started: 628

                             Ligands (in completed collections)

…

Total number of ligands: 72400
Number of ligands started: 0
Number of ligands successfully completed: 0
Number of ligands failed: 0

                            Dockings (in completed collections)

…

Docking runs per ligand: 2
Number of dockings started: 0
Number of dockings successfully completed: 0
Number of dockings failed: 0

#2

Hey Rose,

Have you solved this problem? I am using pbs system and came across the same issue.

Thanks,
Tammy